BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G08SP1|AL429628
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1386 1606 0.0
>3x_Contig1386
Length = 5452
Score = 1606 bits (809), Expect = 0.0
Identities = 825/829 (99%), Gaps = 2/829 (0%)
Strand = Plus / Plus
Query: 1 atacagagttttttgagt-caggtatataaagggtaaaagtttaaggaagaaatatttca 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3794 atacagagttttttgagtgcaggtatataaagggtaaaagtttaaggaagaaatatttca 3853
Query: 60 atccggaaatgattacatatattgtatggttctatcctttaataaataagggaaacaaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3854 atccggaaatgattacatatattgtatggttctatcctttaataaataagggaaacaaat 3913
Query: 120 tataaattttttctggttcttactttacttctttccttcactcttttacttaatatataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3914 tataaattttttctggttcttactttacttctttccttcactcttttacttaatatataa 3973
Query: 180 aataatactattattgtttaattaataatacttctgttatcaattaaggtttaagtcttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3974 aataatactattattgtttaattaataatacttctgttatcaattaaggtttaagtcttt 4033
Query: 240 acatcaataaaagataaattaagttcgaatttgattgcttgcttgataaaaagttggtaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4034 acatcaataaaagataaattaagttcgaatttgattgcttgcttgataaaaagttggtaa 4093
Query: 300 aagaaatctctcaagctgaaattaaaccaaaactctaatataagavaaaaaaatagaaaa 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4094 aagaaatctctcaagctgaaattaaaccaaaactctaatataagaaaaaaaaatagaaaa 4153
Query: 360 tgctttcaatcttagacaattcgcttcgtggtgttaactttgtgtttttaatcattgttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4154 tgctttcaatcttagacaattcgcttcgtggtgttaactttgtgtttttaatcattgttc 4213
Query: 420 tcggtctagtcggtaatttgattgctactcaggrccattctagttccagagttaactttg 479
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4214 tcggtctagtcggtaatttgattgctactcaggaccattctagttccagagttaactttg 4273
Query: 480 ctatctttgctgctgttttcggtatcgttttcgactcgttgtatgctttgatagctaact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4274 ctatctttgctgctgttttcggtatcgttttcgactcgttgtatgctttgatagctaact 4333
Query: 540 tcatctcagctttggcttggcctatcatattagtctctttggacttcttgaactgggttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4334 tcatctcagctttggcttggcctatcatattagtctctttggacttcttgaactgggttt 4393
Query: 600 tcaccttctctgcagccactgctttggcgcgttggtatccgtggtggttcttgtactaac 659
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4394 tcaccttctctgcagccactgctttggc-cgttggtatccgtggtggttcttgtactaac 4452
Query: 660 gacagtttcacttccggaaacaagattgctgaaggttctaaggacagatgtcgtaaggca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4453 gacagtttcacttccggaaacaagattgctgaaggttctaaggacagatgtcgtaaggca 4512
Query: 720 caagcttctactgtgttcttgtacttctcctttgccattttcttggtcaagttcatcttg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4513 caagcttctactgtgttcttgtacttctcctttgccattttcttggtcaagttcatcttg 4572
Query: 780 agcattgttaatgctatcacttccggtgctttcgggaccagttccaaca 828
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4573 agcattgttaatgctatcacttccggtgctttcgggaccagttccaaca 4621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7877
Number of Sequences: 1807
Number of extensions: 7877
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)